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Hekkelman, Maarten L., de Vries, Ida, Joosten, Robbie P., Perrakis, Anastassis (2023) AlphaFill: enriching AlphaFold models with ligands and cofactors. Nature Methods, 20 (2) 205-213 doi:10.1038/s41592-022-01685-y

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Reference TypeJournal (article/letter/editorial)
TitleAlphaFill: enriching AlphaFold models with ligands and cofactors
JournalNature Methods
AuthorsHekkelman, Maarten L.Author
de Vries, IdaAuthor
Joosten, Robbie P.Author
Perrakis, AnastassisAuthor
Year2023 (February)Volume20
Issue2
PublisherSpringer Science and Business Media LLC
DOIdoi:10.1038/s41592-022-01685-ySearch in ResearchGate
Generate Citation Formats
Mindat Ref. ID15695830Long-form Identifiermindat:1:5:15695830:3
GUID0
Full ReferenceHekkelman, Maarten L., de Vries, Ida, Joosten, Robbie P., Perrakis, Anastassis (2023) AlphaFill: enriching AlphaFold models with ligands and cofactors. Nature Methods, 20 (2) 205-213 doi:10.1038/s41592-022-01685-y
Plain TextHekkelman, Maarten L., de Vries, Ida, Joosten, Robbie P., Perrakis, Anastassis (2023) AlphaFill: enriching AlphaFold models with ligands and cofactors. Nature Methods, 20 (2) 205-213 doi:10.1038/s41592-022-01685-y
In(2023, February) Nature Methods Vol. 20 (2) Springer Science and Business Media LLC

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van Beusekom, Bart, Joosten, Krista, Hekkelman, Maarten L., Joosten, Robbie P., Perrakis, Anastassis (2018) Homology-based loop modeling yields more complete crystallographic protein structures. IUCrJ, 5 (5). 585-594 doi:10.1107/s2052252518010552
van Beusekom, Bart, Wezel, Natasja, Hekkelman, Maarten L., Perrakis, Anastassis, Emsley, Paul, Joosten, Robbie P. (2019) Building and rebuilding N-glycans in protein structure models. Acta Crystallographica Section D Structural Biology, 75 (4). 416-425 doi:10.1107/s2059798319003875
Joosten, Robbie P., Long, Fei, Murshudov, Garib N., Perrakis, Anastassis (2014) ThePDB_REDOserver for macromolecular structure model optimization. IUCrJ, 1 (4). 213-220 doi:10.1107/s2052252514009324
(2023) AlphaFold and beyond. Nature Methods, 20 (2) 163 doi:10.1038/s41592-023-01790-6
Joosten, Robbie P., Joosten, Krista, Murshudov, Garib N., Perrakis, Anastassis (2012) PDB_REDO: constructive validation, more than just looking for errors. Acta Crystallographica Section D Biological Crystallography, 68 (4). 484-496 doi:10.1107/s0907444911054515
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