Vote for your favorite mineral in #MinCup25! - Zunyite vs. Molybdenite
It's the visually-unmistakable #zunyite vs the physically funky #molybdenite.
Log InRegister
Quick Links : The Mindat ManualThe Rock H. Currier Digital LibraryMindat Newsletter [Free Download]
Home PageAbout MindatThe Mindat ManualHistory of MindatCopyright StatusWho We AreContact UsAdvertise on Mindat
Donate to MindatCorporate SponsorshipSponsor a PageSponsored PagesMindat AdvertisersAdvertise on Mindat
Learning CenterWhat is a mineral?The most common minerals on earthInformation for EducatorsMindat ArticlesThe ElementsThe Rock H. Currier Digital LibraryGeologic Time
Minerals by PropertiesMinerals by ChemistryAdvanced Locality SearchRandom MineralRandom LocalitySearch by minIDLocalities Near MeSearch ArticlesSearch GlossaryMore Search Options
Search For:
Mineral Name:
Locality Name:
Keyword(s):
 
The Mindat ManualAdd a New PhotoRate PhotosLocality Edit ReportCoordinate Completion ReportAdd Glossary Item
Mining CompaniesStatisticsUsersMineral MuseumsClubs & OrganizationsMineral Shows & EventsThe Mindat DirectoryDevice SettingsThe Mineral Quiz
Photo SearchPhoto GalleriesSearch by ColorNew Photos TodayNew Photos YesterdayMembers' Photo GalleriesPast Photo of the Day GalleryPhotography

Dilek, Isil, Madrid, Marcela, Singh, Rojendra, Urrea, Christian P., Armitage, Bruce A. (2005) Effect of PNA Backbone Modifications on Cyanine Dye Binding to PNA−DNA Duplexes Investigated by Optical Spectroscopy and Molecular Dynamics Simulations. Journal Of The American Chemical Society, 127 (10) 3339-3345 doi:10.1021/ja045145a

Advanced
   -   Only viewable:
Reference TypeJournal (article/letter/editorial)
TitleEffect of PNA Backbone Modifications on Cyanine Dye Binding to PNA−DNA Duplexes Investigated by Optical Spectroscopy and Molecular Dynamics Simulations
JournalJournal Of The American Chemical Society
AuthorsDilek, IsilAuthor
Madrid, MarcelaAuthor
Singh, RojendraAuthor
Urrea, Christian P.Author
Armitage, Bruce A.Author
Year2005 (March)Volume127
Issue10
PublisherAmerican Chemical Society (ACS)
DOIdoi:10.1021/ja045145aSearch in ResearchGate
Generate Citation Formats
Mindat Ref. ID1644843Long-form Identifiermindat:1:5:1644843:6
GUID0
Full ReferenceDilek, Isil, Madrid, Marcela, Singh, Rojendra, Urrea, Christian P., Armitage, Bruce A. (2005) Effect of PNA Backbone Modifications on Cyanine Dye Binding to PNA−DNA Duplexes Investigated by Optical Spectroscopy and Molecular Dynamics Simulations. Journal Of The American Chemical Society, 127 (10) 3339-3345 doi:10.1021/ja045145a
Plain TextDilek, Isil, Madrid, Marcela, Singh, Rojendra, Urrea, Christian P., Armitage, Bruce A. (2005) Effect of PNA Backbone Modifications on Cyanine Dye Binding to PNA−DNA Duplexes Investigated by Optical Spectroscopy and Molecular Dynamics Simulations. Journal Of The American Chemical Society, 127 (10) 3339-3345 doi:10.1021/ja045145a
In(2005, March) Journal Of The American Chemical Society Vol. 127 (10) American Chemical Society (ACS)

See Also

These are possibly similar items as determined by title/reference text matching only.

Smith, Jeffrey O., Olson, Darren A., Armitage, Bruce A. (1999) Molecular Recognition of PNA-Containing Hybrids:  Spontaneous Assembly of Helical Cyanine Dye Aggregates on PNA Templates. Journal Of The American Chemical Society, 121 (12) 2686-2695 doi:10.1021/ja9837553
Marin, Violeta L., Armitage, Bruce A. (2005) RNA Guanine Quadruplex Invasion by Complementary and Homologous PNA Probes. Journal Of The American Chemical Society, 127 (22) 8032-8033 doi:10.1021/ja051102y
Wang, Miaomiao, Dilek, Isil, Armitage, Bruce A. (2003) Electrostatic Contributions to Cyanine Dye Aggregation on Peptide Nucleic Acid Templates†. Langmuir, 19. 6449-6455 doi:10.1021/la0342161
Datta, Bhaskar, Armitage, Bruce A. (2001) Hybridization of PNA to Structured DNA Targets:  Quadruplex Invasion and the Overhang Effect. Journal Of The American Chemical Society, 123 (39) 9612-9619 doi:10.1021/ja016204c
Datta, Bhaskar, Bier, Mark E., Roy, Subhadeep, Armitage, Bruce A. (2005) Quadruplex Formation by a Guanine-Rich PNA Oligomer. Journal Of The American Chemical Society, 127 (12) 4199-4207 doi:10.1021/ja0446202
Kushon, Stuart A., Jordan, Jason P., Seifert, Jennifer L., Nielsen, Henrik, Nielsen, Peter E., Armitage, Bruce A. (2001) Effect of Secondary Structure on the Thermodynamics and Kinetics of PNA Hybridization to DNA Hairpins. Journal Of The American Chemical Society, 123 (44) 10805-10813 doi:10.1021/ja016310e
Watson, Richard M., Skorik, Yury A., Patra, Goutam K., Achim, Catalina (2005) Influence of Metal Coordination on the Mismatch Tolerance of Ligand-Modified PNA Duplexes. Journal Of The American Chemical Society, 127 (42) 14628-14639 doi:10.1021/ja051336h
Kadam, Vijay N., Saikrishnan, Kayarat, Ganesh, Krishna N. (2018) 5-Amidodansyl-U (UD) Peptide Nucleic Acid (PNA) as a Fluorescent Sensor of the Local Dielectric Constant (ε) in PNA Duplexes: Major Grooves in PNA Duplexes Are More Hydrophobic Than Major Grooves in DNA–DNA Duplexes. The Journal of Physical Chemistry C, 122 (25). 14004-14013 doi:10.1021/acs.jpcc.8b01098
Wittung, Pernilla, Eriksson, Magdalena, Lyng, Reidar, Nielsen, Peter E., Norden, Bengt (1995) Induced Chirality in PNA-PNA Duplexes. Journal Of The American Chemical Society, 117 (41) 10167-10173 doi:10.1021/ja00146a001
Rapireddy, Srinivas, He, Gaofei, Roy, Subhadeep, Armitage, Bruce A., Ly, Danith H. (2007) Strand Invasion of Mixed-Sequence B-DNA by Acridine-Linked, γ-Peptide Nucleic Acid (γ-PNA) Journal Of The American Chemical Society, 129 (50) 15596-15600 doi:10.1021/ja074886j
Wang, Miaomiao, Silva, Gloria L., Armitage, Bruce A. (2000) DNA-Templated Formation of a Helical Cyanine Dye J-Aggregate. Journal Of The American Chemical Society, 122 (41) 9977-9986 doi:10.1021/ja002184n
 
and/or  
Mindat.org is an outreach project of the Hudson Institute of Mineralogy, a 501(c)(3) not-for-profit organization.
Copyright © mindat.org and the Hudson Institute of Mineralogy 1993-2025, except where stated. Most political location boundaries are © OpenStreetMap contributors. Mindat.org relies on the contributions of thousands of members and supporters. Founded in 2000 by Jolyon Ralph.
To cite: Ralph, J., Von Bargen, D., Martynov, P., Zhang, J., Que, X., Prabhu, A., Morrison, S. M., Li, W., Chen, W., & Ma, X. (2025). Mindat.org: The open access mineralogy database to accelerate data-intensive geoscience research. American Mineralogist, 110(6), 833–844. doi:10.2138/am-2024-9486.
Privacy Policy - Terms & Conditions - Contact Us / DMCA issues - Report a bug/vulnerability Current server date and time: September 12, 2025 06:28:41
Go to top of page