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(2023, October) Nature Methods Vol. 20 (10) Springer Science and Business Media LLC

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Reference TypeJournal (issue)
JournalNature MethodsISSN1548-7091
Year2023 (October)Volume20
Issue<   10   >
PublisherSpringer Science and Business Media LLC
Mindat Ref. ID16876656Long-form Identifiermindat:1:5:16876656:9
GUID0
Full Reference(2023, October) Nature Methods Vol. 20 (10) Springer Science and Business Media LLC
Plain Text(2023, October) Nature Methods Vol. 20 (10) Springer Science and Business Media LLC
In(2023) Nature Methods Vol. 20. Springer Science and Business Media LLC

Contains

(2023) Registered Reports: what we’ve learned so far. Nature Methods, 20 (10) 1439 doi:10.1038/s41592-023-02052-1
Marx, Vivien (2023) When housing is insecure. Nature Methods, 20 (10) 1440 doi:10.1038/s41592-023-02013-8
Dupuis, Sunnyjoy, Merchant, Sabeeha S. (2023) Chlamydomonas reinhardtii: a model for photosynthesis and so much more. Nature Methods, 20 (10) 1441-1442 doi:10.1038/s41592-023-02023-6
Selzer, Gabriel J., Rueden, Curtis T., Hiner, Mark C., Evans, Edward L., Harrington, Kyle I. S., Eliceiri, Kevin W. (2023) napari-imagej: ImageJ ecosystem access from napari. Nature Methods, 20 (10) 1443-1444 doi:10.1038/s41592-023-01990-0
Last, Mart G. F., Voortman, Lenard M., Sharp, Thomas H. (2023) scNodes: a correlation and processing toolkit for super-resolution fluorescence and electron microscopy. Nature Methods, 20 (10) 1445-1446 doi:10.1038/s41592-023-01991-z
Vogt, Nina (2023) Droplet-based power sources for modulating neural activity. Nature Methods, 20 (10) 1447 doi:10.1038/s41592-023-02048-x
Tang, Lei (2023) Resolving epigenetic base ambiguity. Nature Methods, 20 (10) 1448 doi:10.1038/s41592-023-02049-w
Tang, Lin (2023) Large model predicts variant effects. Nature Methods, 20 (10) 1448 doi:10.1038/s41592-023-02050-3
Seydel, Caroline (2023) Greening the lab. Nature Methods, 20 (10) 1449-1453 doi:10.1038/s41592-023-02024-5
Wang, Wenjing, Shen, Jiaqi (2023) Fluorogenic chemically induced dimerization. Nature Methods, 20 (10) 1454-1455 doi:10.1038/s41592-023-01989-7
(2023) scNanoHi-C uncovers single-cell high-order chromatin structures and gene regulation. Nature Methods, 20 (10) 1456-1457 doi:10.1038/s41592-023-01979-9
(2023) Capturing detailed cellular landscapes by montage cryo-electron tomography. Nature Methods, 20 (10) 1458-1459 doi:10.1038/s41592-023-02000-z
(2023) Mapping deformations and increasing quantitative accuracy in expansion microscopy. Nature Methods, 20 (10) 1460-1461 doi:10.1038/s41592-023-02015-6
Velten, Britta, Stegle, Oliver (2023) Principles and challenges of modeling temporal and spatial omics data. Nature Methods, 20 (10) 1462-1474 doi:10.1038/s41592-023-01992-y
Li, Yuanyue, Fiehn, Oliver (2023) Flash entropy search to query all mass spectral libraries in real time. Nature Methods, 20 (10) 1475-1478 doi:10.1038/s41592-023-02012-9
Yang, Tianjin, Buholzer, Karin J., Sottini, Andrea, Cao, Xiaobao, deMello, Andrew, Nettels, Daniel, Schuler, Benjamin (2023) Rapid droplet-based mixing for single-molecule spectroscopy. Nature Methods, 20 (10) 1479-1482 doi:10.1038/s41592-023-01995-9
Kolmogorov, Mikhail, Billingsley, Kimberley J., Mastoras, Mira, Meredith, Melissa, Monlong, Jean, Lorig-Roach, Ryan, Asri, Mobin, Alvarez Jerez, Pilar, Malik, Laksh, Dewan, Ramita, Reed, Xylena, Genner, Rylee M., Daida, Kensuke, Behera, Sairam, Shafin, Kishwar, Pesout, Trevor, Prabakaran, Jeshuwin, Carnevali, Paolo, Yang, Jianzhi, Rhie, Arang, Scholz, Sonja W., Traynor, Bryan J., Miga, Karen H., Jain, Miten, Timp, Winston, Phillippy, Adam M., Chaisson, Mark, Sedlazeck, Fritz J., Blauwendraat, Cornelis, Paten, Benedict (2023) Scalable Nanopore sequencing of human genomes provides a comprehensive view of haplotype-resolved variation and methylation. Nature Methods, 20 (10) 1483-1492 doi:10.1038/s41592-023-01993-x
Li, Wen, Lu, Jiansen, Lu, Ping, Gao, Yun, Bai, Yichen, Chen, Kexuan, Su, Xinjie, Li, Mengyao, Liu, Jun’e, Chen, Yijun, Wen, Lu, Tang, Fuchou (2023) scNanoHi-C: a single-cell long-read concatemer sequencing method to reveal high-order chromatin structures within individual cells. Nature Methods, 20 (10) 1493-1505 doi:10.1038/s41592-023-01978-w
Pool, Allan-Hermann, Poldsam, Helen, Chen, Sisi, Thomson, Matt, Oka, Yuki (2023) Recovery of missing single-cell RNA-sequencing data with optimized transcriptomic references. Nature Methods, 20 (10) 1506-1515 doi:10.1038/s41592-023-02003-w
Ribeiro, Antonio J. M., Riziotis, Ioannis G., Tyzack, Jonathan D., Borkakoti, Neera, Thornton, Janet M. (2023) EzMechanism: an automated tool to propose catalytic mechanisms of enzyme reactions. Nature Methods, 20 (10) 1516-1522 doi:10.1038/s41592-023-02006-7
Buljan, Marija, Banaei-Esfahani, Amir, Blattmann, Peter, Meier-Abt, Fabienne, Shao, Wenguang, Vitek, Olga, Tang, Hua, Aebersold, Ruedi (2023) A computational framework for the inference of protein complex remodeling from whole-proteome measurements. Nature Methods, 20 (10) 1523-1529 doi:10.1038/s41592-023-02011-w
Rosenberger, Florian A., Thielert, Marvin, Strauss, Maximilian T., Schweizer, Lisa, Ammar, Constantin, Mädler, Sophia C., Metousis, Andreas, Skowronek, Patricia, Wahle, Maria, Madden, Katherine, Gote-Schniering, Janine, Semenova, Anna, Schiller, Herbert B., Rodriguez, Edwin, Nordmann, Thierry M., Mund, Andreas, Mann, Matthias (2023) Spatial single-cell mass spectrometry defines zonation of the hepatocyte proteome. Nature Methods, 20 (10) 1530-1536 doi:10.1038/s41592-023-02007-6
Yang, Jie E., Larson, Matthew R., Sibert, Bryan S., Kim, Joseph Y., Parrell, Daniel, Sanchez, Juan C., Pappas, Victoria, Kumar, Anil, Cai, Kai, Thompson, Keith, Wright, Elizabeth R. (2023) Correlative montage parallel array cryo-tomography for in situ structural cell biology. Nature Methods, 20 (10) 1537-1543 doi:10.1038/s41592-023-01999-5
Legnini, Ivano, Emmenegger, Lisa, Zappulo, Alessandra, Rybak-Wolf, Agnieszka, Wurmus, Ricardo, Martinez, Anna Oliveras, Jara, Cledi Cerda, Boltengagen, Anastasiya, Hessler, Talé, Mastrobuoni, Guido, Kempa, Stefan, Zinzen, Robert, Woehler, Andrew, Rajewsky, Nikolaus (2023) Spatiotemporal, optogenetic control of gene expression in organoids. Nature Methods, 20 (10) 1544-1552 doi:10.1038/s41592-023-01986-w
Bottone, Sara, Joliot, Octave, Cakil, Zeyneb Vildan, El Hajji, Lina, Rakotoarison, Louise-Marie, Boncompain, Gaelle, Perez, Franck, Gautier, Arnaud (2023) A fluorogenic chemically induced dimerization technology for controlling, imaging and sensing protein proximity. Nature Methods, 20 (10) 1553-1562 doi:10.1038/s41592-023-01988-8
Jiang, Li, Xie, Xin, Su, Ni, Zhang, Dasheng, Chen, Xianjun, Xu, Xiaochen, Zhang, Bibi, Huang, Kaiyi, Yu, Jingwei, Fang, Mengyue, Bao, Bingkun, Zuo, Fangting, Yang, Lipeng, Zhang, Rui, Li, Huiwen, Huang, Xinyi, Chen, Zhengda, Zeng, Qingmei, Liu, Renmei, Lin, Qiuning, Zhao, Yuzheng, Ren, Aiming, Zhu, Linyong, Yang, Yi (2023) Large Stokes shift fluorescent RNAs for dual-emission fluorescence and bioluminescence imaging in live cells. Nature Methods, 20 (10) 1563-1572 doi:10.1038/s41592-023-01997-7
Damstra, Hugo G. J., Passmore, Josiah B., Serweta, Albert K., Koutlas, Ioannis, Burute, Mithila, Meye, Frank J., Akhmanova, Anna, Kapitein, Lukas C. (2023) GelMap: intrinsic calibration and deformation mapping for expansion microscopy. Nature Methods, 20 (10) 1573-1580 doi:10.1038/s41592-023-02001-y
Eom, Minho, Han, Seungjae, Park, Pojeong, Kim, Gyuri, Cho, Eun-Seo, Sim, Jueun, Lee, Kang-Han, Kim, Seonghoon, Tian, He, Böhm, Urs L., Lowet, Eric, Tseng, Hua-an, Choi, Jieun, Lucia, Stephani Edwina, Ryu, Seung Hyun, Rózsa, Márton, Chang, Sunghoe, Kim, Pilhan, Han, Xue, Piatkevich, Kiryl D., Choi, Myunghwan, Kim, Cheol-Hee, Cohen, Adam E., Chang, Jae-Byum, Yoon, Young-Gyu (2023) Statistically unbiased prediction enables accurate denoising of voltage imaging data. Nature Methods, 20 (10) 1581-1592 doi:10.1038/s41592-023-02005-8
Li, Zhongyu, Shang, Zengyi, Liu, Jingyi, Zhen, Haotian, Zhu, Entao, Zhong, Shilin, Sturgess, Robyn N., Zhou, Yitian, Hu, Xuemeng, Zhao, Xingyue, Wu, Yi, Li, Peiqi, Lin, Rui, Ren, Jing (2023) D-LMBmap: a fully automated deep-learning pipeline for whole-brain profiling of neural circuitry. Nature Methods, 20 (10) 1593-1604 doi:10.1038/s41592-023-01998-6
Zhang, Hanbin, Papadaki, Stavrini, Sun, Xiaoting, Wang, Xinyue, Drobizhev, Mikhail, Yao, Luxia, Rehbock, Michel, Köster, Reinhard W., Wu, Lianfeng, Namikawa, Kazuhiko, Piatkevich, Kiryl D. (2023) Quantitative assessment of near-infrared fluorescent proteins. Nature Methods, 20 (10) 1605-1616 doi:10.1038/s41592-023-01975-z

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