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Yang, Ka, Paulo, Joao A., Gygi, Steven P., Yu, Qing (2024) Enhanced Sample Multiplexing-Based Targeted Proteomics with Intelligent Data Acquisition. Journal of the American Society for Mass Spectrometry, 35 (10). doi:10.1021/jasms.4c00234

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Reference TypeJournal (article/letter/editorial)
TitleEnhanced Sample Multiplexing-Based Targeted Proteomics with Intelligent Data Acquisition
JournalJournal of the American Society for Mass Spectrometry
AuthorsYang, KaAuthor
Paulo, Joao A.Author
Gygi, Steven P.Author
Yu, QingAuthor
Year2024 (October 2)Volume35
Issue10
PublisherAmerican Chemical Society (ACS)
DOIdoi:10.1021/jasms.4c00234Search in ResearchGate
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Mindat Ref. ID17632007Long-form Identifiermindat:1:5:17632007:4
GUID0
Full ReferenceYang, Ka, Paulo, Joao A., Gygi, Steven P., Yu, Qing (2024) Enhanced Sample Multiplexing-Based Targeted Proteomics with Intelligent Data Acquisition. Journal of the American Society for Mass Spectrometry, 35 (10). doi:10.1021/jasms.4c00234
Plain TextYang, Ka, Paulo, Joao A., Gygi, Steven P., Yu, Qing (2024) Enhanced Sample Multiplexing-Based Targeted Proteomics with Intelligent Data Acquisition. Journal of the American Society for Mass Spectrometry, 35 (10). doi:10.1021/jasms.4c00234
In(2024, October) Journal of the American Society for Mass Spectrometry Vol. 35 (10). American Chemical Society (ACS)

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Navarrete-Perea, Jose, Gygi, Steven P., Paulo, Joao A. (2021) HYpro16: A Two-Proteome Mixture to Assess Interference in Isobaric Tag-Based Sample Multiplexing Experiments. Journal of the American Society for Mass Spectrometry, 32 (1) 247-254 doi:10.1021/jasms.0c00299
Liu, Xinyue, Gygi, Steven P., Paulo, Joao A. (2021) A Semiautomated Paramagnetic Bead-Based Platform for Isobaric Tag Sample Preparation. Journal of the American Society for Mass Spectrometry, 32 (6) 1519-1529 doi:10.1021/jasms.1c00077
Gygi, Jeremy P., Ramin Rad, , Navarrete-Perea, Jose, Younesi, Simon, Gygi, Steven P., Paulo, Joao A. (2020) A Triple Knockout Isobaric-Labeling Quality Control Platform with an Integrated Online Database Search. Journal of the American Society for Mass Spectrometry, 31 (7) 1344-1349 doi:10.1021/jasms.0c00029
Paulo, Joao A., O’Connell, Jeremy D., Gygi, Steven P. (2016) A Triple Knockout (TKO) Proteomics Standard for Diagnosing Ion Interference in Isobaric Labeling Experiments. Journal of the American Society for Mass Spectrometry, 27 (10). 1620-1625 doi:10.1007/s13361-016-1434-9
Dens, Ceder, Adams, Charlotte, Laukens, Kris, Bittremieux, Wout (2024) Machine Learning Strategies to Tackle Data Challenges in Mass Spectrometry-Based Proteomics. Journal of the American Society for Mass Spectrometry, 35 (9). doi:10.1021/jasms.4c00180
Yu, Qing, Liu, Xinyue, Keller, Mark P., Navarrete-Perea, Jose, Zhang, Tian, Fu, Sipei, Vaites, Laura P., Shuken, Steven R., Schmid, Ernst, Keele, Gregory R., Li, Jiaming, Huttlin, Edward L., Rashan, Edrees H., Simcox, Judith, Churchill, Gary A., Schweppe, Devin K., Attie, Alan D., Paulo, Joao A., Gygi, Steven P. (2023) Sample multiplexing-based targeted pathway proteomics with real-time analytics reveals the impact of genetic variation on protein expression. Nature Communications, 14 (1) doi:10.1038/s41467-023-36269-7
Yu, Qing, Xiao, Haopeng, Jedrychowski, Mark P., Schweppe, Devin K., Navarrete-Perea, Jose, Knott, Jeffrey, Rogers, John, Chouchani, Edward T., Gygi, Steven P. (2020) Sample multiplexing for targeted pathway proteomics in aging mice. Proceedings of the National Academy of Sciences, 117 (18) 9723-9732 doi:10.1073/pnas.1919410117
Nitz, Alyssa A, Mongane, Ansima R, Squires, Luke, Payne, Samuel H (2024) Attracting Computational Researchers to Proteomics. Journal of the American Society for Mass Spectrometry, 35 (10). doi:10.1021/jasms.4c00185
O’Brien, Jonathon J., Gunawardena, Harsha P., Paulo, Joao A., Chen, Xian, Ibrahim, Joseph G., Gygi, Steven P., Qaqish, Bahjat F. (2018) The effects of nonignorable missing data on label-free mass spectrometry proteomics experiments. The Annals of Applied Statistics, 12 (4) 2075-2095 doi:10.1214/18-aoas1144
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