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Almet, Axel A., Tsai, Yuan-Chen, Watanabe, Momoko, Nie, Qing (2024) Inferring pattern-driving intercellular flows from single-cell and spatial transcriptomics. Nature Methods, 21 (10). doi:10.1038/s41592-024-02380-w

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Reference TypeJournal (article/letter/editorial)
TitleInferring pattern-driving intercellular flows from single-cell and spatial transcriptomics
JournalNature Methods
AuthorsAlmet, Axel A.Author
Tsai, Yuan-ChenAuthor
Watanabe, MomokoAuthor
Nie, QingAuthor
Year2024 (October)Volume21
Issue10
PublisherSpringer Science and Business Media LLC
DOIdoi:10.1038/s41592-024-02380-wSearch in ResearchGate
Generate Citation Formats
Mindat Ref. ID17657816Long-form Identifiermindat:1:5:17657816:1
GUID0
Full ReferenceAlmet, Axel A., Tsai, Yuan-Chen, Watanabe, Momoko, Nie, Qing (2024) Inferring pattern-driving intercellular flows from single-cell and spatial transcriptomics. Nature Methods, 21 (10). doi:10.1038/s41592-024-02380-w
Plain TextAlmet, Axel A., Tsai, Yuan-Chen, Watanabe, Momoko, Nie, Qing (2024) Inferring pattern-driving intercellular flows from single-cell and spatial transcriptomics. Nature Methods, 21 (10). doi:10.1038/s41592-024-02380-w
In(2024, October) Nature Methods Vol. 21 (10). Springer Science and Business Media LLC

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(2024) Analyzing submicron spatial transcriptomics data at their original resolution. Nature Methods, 21 (10). doi:10.1038/s41592-024-02416-1
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Zhou, Peijie, Bocci, Federico, Li, Tiejun, Nie, Qing (2024) Spatial transition tensor of single cells. Nature Methods, 21 (6) 1053-1062 doi:10.1038/s41592-024-02266-x
(2024) Advancing sequencing-based spatial transcriptomics with a comprehensive benchmarking study. Nature Methods, 21 (9). doi:10.1038/s41592-024-02326-2
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(2022) Benchmarking spatial and single-cell transcriptomics integration methods. Nature Methods, 19 (6) 656-657 doi:10.1038/s41592-022-01481-8
(2024) MethSCAn: accurate exploratory analysis of single-cell methylomes. Nature Methods, 21 (9). doi:10.1038/s41592-024-02348-w
Zhong, Chengwei, Ang, Kok Siong, Chen, Jinmiao (2024) Interpretable spatially aware dimension reduction of spatial transcriptomics with STAMP. Nature Methods, 21 (11). doi:10.1038/s41592-024-02463-8
Sun, Eric D., Ma, Rong, Navarro Negredo, Paloma, Brunet, Anne, Zou, James (2024) TISSUE: uncertainty-calibrated prediction of single-cell spatial transcriptomics improves downstream analyses. Nature Methods, 21 (3) 444-454 doi:10.1038/s41592-024-02184-y
Zhao, Wei, Johnston, Kevin G., Ren, Honglei, Xu, Xiangmin, Nie, Qing (2023) Inferring neuron-neuron communications from single-cell transcriptomics through NeuronChat. Nature Communications, 14 (1) doi:10.1038/s41467-023-36800-w
 
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