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Najafi, Mehdi, Zazubovich, Valter (2015) Monte Carlo Modeling of Spectral Diffusion Employing Multiwell Protein Energy Landscapes: Application to Pigment–Protein Complexes Involved in Photosynthesis. The Journal of Physical Chemistry B, 119 (25). 7911-7921 doi:10.1021/acs.jpcb.5b02764

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Reference TypeJournal (article/letter/editorial)
TitleMonte Carlo Modeling of Spectral Diffusion Employing Multiwell Protein Energy Landscapes: Application to Pigment–Protein Complexes Involved in Photosynthesis
JournalThe Journal of Physical Chemistry B
AuthorsNajafi, MehdiAuthor
Zazubovich, ValterAuthor
Year2015 (June 25)Volume119
Issue25
PublisherAmerican Chemical Society (ACS)
DOIdoi:10.1021/acs.jpcb.5b02764Search in ResearchGate
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Mindat Ref. ID3885013Long-form Identifiermindat:1:5:3885013:8
GUID0
Full ReferenceNajafi, Mehdi, Zazubovich, Valter (2015) Monte Carlo Modeling of Spectral Diffusion Employing Multiwell Protein Energy Landscapes: Application to Pigment–Protein Complexes Involved in Photosynthesis. The Journal of Physical Chemistry B, 119 (25). 7911-7921 doi:10.1021/acs.jpcb.5b02764
Plain TextNajafi, Mehdi, Zazubovich, Valter (2015) Monte Carlo Modeling of Spectral Diffusion Employing Multiwell Protein Energy Landscapes: Application to Pigment–Protein Complexes Involved in Photosynthesis. The Journal of Physical Chemistry B, 119 (25). 7911-7921 doi:10.1021/acs.jpcb.5b02764
In(2015, June) The Journal of Physical Chemistry B Vol. 119 (25) American Chemical Society (ACS)

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Najafi, Mehdi, Herascu, Nicoleta, Shafiei, Golia, Picorel, Rafael, Zazubovich, Valter (2015) Conformational Changes in Pigment–Protein Complexes at Low Temperatures—Spectral Memory and a Possibility of Cooperative Effects. The Journal of Physical Chemistry B, 119 (23). 6930-6940 doi:10.1021/acs.jpcb.5b02845
Najafi, Mehdi, Herascu, Nicoleta, Seibert, Michael, Picorel, Rafael, Jankowiak, Ryszard, Zazubovich, Valter (2012) Spectral Hole Burning, Recovery, and Thermocycling in Chlorophyll–Protein Complexes: Distributions of Barriers on the Protein Energy Landscape. The Journal of Physical Chemistry B, 116 (38). 11780-11790 doi:10.1021/jp308055r
Herascu, Nicoleta, Najafi, Mehdi, Amunts, Alexey, Pieper, Jörg, Irrgang, Klaus-Dieter, Picorel, Rafael, Seibert, Michael, Zazubovich, Valter (2011) Parameters of the Protein Energy Landscapes of Several Light-Harvesting Complexes Probed via Spectral Hole Growth Kinetics Measurements. The Journal of Physical Chemistry B, 115 (12). 2737-2747 doi:10.1021/jp108775y
Zazubovich, Valter, Jankowiak, Ryszard (2019) How Well Does the Hole-Burning Action Spectrum Represent the Site-Distribution Function of the Lowest-Energy State in Photosynthetic Pigment–Protein Complexes?. The Journal of Physical Chemistry B, 123 (28). 6007-6013 doi:10.1021/acs.jpcb.9b03806
Herascu, Nicoleta, Ahmouda, Somaya, Picorel, Rafael, Seibert, Michael, Jankowiak, Ryszard, Zazubovich, Valter (2011) Effects of the Distributions of Energy or Charge Transfer Rates on Spectral Hole Burning in Pigment–Protein Complexes at Low Temperatures. The Journal of Physical Chemistry B, 115 (50). 15098-15109 doi:10.1021/jp208142k
Herascu, Nicoleta, Hunter, Mark S., Shafiei, Golia, Najafi, Mehdi, Johnson, T. Wade, Fromme, Petra, Zazubovich, Valter (2016) Spectral Hole Burning in Cyanobacterial Photosystem I with P700 in Oxidized and Neutral States. The Journal of Physical Chemistry B, 120 (40). 10483-10495 doi:10.1021/acs.jpcb.6b07803
Shafiei, Golia, Levenberg, Alexander, Lujan, Maria A., Picorel, Rafael, Zazubovich, Valter (2019) Evidence of Simultaneous Spectral Hole Burning Involving Two Tiers of the Protein Energy Landscape in Cytochrome b6f. The Journal of Physical Chemistry B, 123 (51). 10930-10938 doi:10.1021/acs.jpcb.9b09515
Mai, Martina, Zazubovich, Valter, Mansbach, Rachael A. (2024) Identification of Residues Potentially Involved in Optical Shifts in the Water-Soluble Chlorophyll a-Binding Protein through Molecular Dynamics Simulations. The Journal of Physical Chemistry B, 128 (6) 1371-1384 doi:10.1021/acs.jpcb.3c06889
Versace, Rodney E., Lazaridis, Themis (2015) Modeling Protein–Micelle Systems in Implicit Water. The Journal of Physical Chemistry B, 119 (25). 8037-8047 doi:10.1021/acs.jpcb.5b00171
Khirich, Gennady, Loria, J. Patrick (2015) Complexity of Protein Energy Landscapes Studied by Solution NMR Relaxation Dispersion Experiments. The Journal of Physical Chemistry B, 119 (9). 3743-3754 doi:10.1021/acs.jpcb.5b00212
Levenberg, Alexander, Shafiei, Golia, Lujan, Maria A., Giannacopoulos, Steven, Picorel, Rafael, Zazubovich, Valter (2017) Probing Energy Landscapes of Cytochrome b6f with Spectral Hole Burning: Effects of Deuterated Solvent and Detergent. The Journal of Physical Chemistry B, 121 (42). 9848-9858 doi:10.1021/acs.jpcb.7b07686
 
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