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Rutledge, Lesley R., Durst, Holly F., Wetmore, Stacey D. (2008) Computational comparison of the stacking interactions between the aromatic amino acids and the natural or (cationic) methylated nucleobases. Physical Chemistry Chemical Physics, 10 (19). 2801pp. doi:10.1039/b718621e

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Reference TypeJournal (article/letter/editorial)
TitleComputational comparison of the stacking interactions between the aromatic amino acids and the natural or (cationic) methylated nucleobases
JournalPhysical Chemistry Chemical Physics
AuthorsRutledge, Lesley R.Author
Durst, Holly F.Author
Wetmore, Stacey D.Author
Year2008Volume10
Issue19
PublisherRoyal Society of Chemistry (RSC)
DOIdoi:10.1039/b718621eSearch in ResearchGate
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Mindat Ref. ID4010508Long-form Identifiermindat:1:5:4010508:6
GUID0
Full ReferenceRutledge, Lesley R., Durst, Holly F., Wetmore, Stacey D. (2008) Computational comparison of the stacking interactions between the aromatic amino acids and the natural or (cationic) methylated nucleobases. Physical Chemistry Chemical Physics, 10 (19). 2801pp. doi:10.1039/b718621e
Plain TextRutledge, Lesley R., Durst, Holly F., Wetmore, Stacey D. (2008) Computational comparison of the stacking interactions between the aromatic amino acids and the natural or (cationic) methylated nucleobases. Physical Chemistry Chemical Physics, 10 (19). 2801pp. doi:10.1039/b718621e
In(2008) Physical Chemistry Chemical Physics Vol. 10 (19) Royal Society of Chemistry (RSC)

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Rutledge, Lesley R., Campbell-Verduyn, Lachlan S., Wetmore, Stacey D. (2007) Characterization of the stacking interactions between DNA or RNA nucleobases and the aromatic amino acids. Chemical Physics Letters, 444. 167-175 doi:10.1016/j.cplett.2007.06.090
Rutledge, Lesley R., Churchill, Cassandra D. M., Wetmore, Stacey D. (2010) A Preliminary Investigation of the Additivity of π−π or π+−π Stacking and T-Shaped Interactions between Natural or Damaged DNA Nucleobases and Histidine. The Journal of Physical Chemistry B, 114 (9). 3355-3367 doi:10.1021/jp911990g
Churchill, Cassandra D. M., Navarro-Whyte, Lex, Rutledge, Lesley R., Wetmore, Stacey D. (2009) Effects of the biological backbone on DNA–protein stacking interactions. Physical Chemistry Chemical Physics, 11 (45). 10657pp. doi:10.1039/b910747a
Churchill, Cassandra D. M., Rutledge, Lesley R., Wetmore, Stacey D. (2010) Effects of the biological backbone on stacking interactions at DNA–protein interfaces: the interplay between the backbone⋯π and π⋯π components. Physical Chemistry Chemical Physics, 12 (43). 14515pp. doi:10.1039/c0cp00550a
Rutledge, Lesley R., Wetmore, Stacey D. (2012) A computational proposal for the experimentally observed discriminatory behavior of hypoxanthine, a weak universal nucleobase. Physical Chemistry Chemical Physics, 14 (8). 2743pp. doi:10.1039/c2cp23600a
Lait, Linda A., Rutledge, Lesley R., Millen, Andrea L., Wetmore, Stacey D. (2008) yDNA versus xDNA Pyrimidine Nucleobases: Computational Evidence for Dependence of Duplex Stability on Spacer Location. The Journal of Physical Chemistry B, 112 (39). 12526-12536 doi:10.1021/jp805547p
Rutledge, Lesley R., Campbell-Verduyn, Lachlan S., Hunter, Ken C., Wetmore, Stacey D. (2006) Characterization of Nucleobase−Amino Acid Stacking Interactions Utilized by a DNA Repair Enzyme. The Journal of Physical Chemistry B, 110 (39). 19652-19663 doi:10.1021/jp061939v
Wheaton, Craig A., Dobrowolski, Sarah L., Millen, Andrea L., Wetmore, Stacey D. (2006) Nitrosubstituted aromatic molecules as universal nucleobases: Computational analysis of stacking interactions. Chemical Physics Letters, 428. 157-166 doi:10.1016/j.cplett.2006.07.051
Negi, Indu, Kathuria, Preetleen, Sharma, Purshotam, Wetmore, Stacey D. (2017) How do hydrophobic nucleobases differ from natural DNA nucleobases? Comparison of structural features and duplex properties from QM calculations and MD simulations. Physical Chemistry Chemical Physics, 19 (25). 16365-16374 doi:10.1039/c7cp02576a
LaPointe, Shenna M., Wetmore, Stacey D. (2005) Characterization of the binding interactions between a unique class of modified purines and the natural nucleobases. Chemical Physics Letters, 408. 322-328 doi:10.1016/j.cplett.2005.04.039
Rutledge, Lesley R., Navarro-Whyte, Lex, Peterson, Terri L., Wetmore, Stacey D. (2011) Effects of Extending the Computational Model on DNA–Protein T-shaped Interactions: The Case of Adenine–Histidine Dimers. The Journal of Physical Chemistry A, 115 (45). 12646-12658 doi:10.1021/jp203248j
 
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