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Juraszek, Jarek, Vreede, Jocelyne, Bolhuis, Peter G. (2012) Transition path sampling of protein conformational changes. Chemical Physics, 396. 30-44 doi:10.1016/j.chemphys.2011.04.032

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Reference TypeJournal (article/letter/editorial)
TitleTransition path sampling of protein conformational changes
JournalChemical Physics
AuthorsJuraszek, JarekAuthor
Vreede, JocelyneAuthor
Bolhuis, Peter G.Author
Year2012 (March)Volume396
PublisherElsevier BV
DOIdoi:10.1016/j.chemphys.2011.04.032Search in ResearchGate
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Mindat Ref. ID5962861Long-form Identifiermindat:1:5:5962861:3
GUID0
Full ReferenceJuraszek, Jarek, Vreede, Jocelyne, Bolhuis, Peter G. (2012) Transition path sampling of protein conformational changes. Chemical Physics, 396. 30-44 doi:10.1016/j.chemphys.2011.04.032
Plain TextJuraszek, Jarek, Vreede, Jocelyne, Bolhuis, Peter G. (2012) Transition path sampling of protein conformational changes. Chemical Physics, 396. 30-44 doi:10.1016/j.chemphys.2011.04.032
In(n.d.) Chemical Physics Vol. 396. Elsevier BV

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Rogal, Jutta, Lechner, Wolfgang, Juraszek, Jarek, Ensing, Bernd, Bolhuis, Peter G. (2010) The reweighted path ensemble. The Journal of Chemical Physics, 133 (17). 174109pp. doi:10.1063/1.3491817
Vreede, Jocelyne, Wolf, Maarten G., de Leeuw, Simon W., Bolhuis, Peter G. (2009) Reordering Hydrogen Bonds Using Hamiltonian Replica Exchange Enhances Sampling of Conformational Changes in Biomolecular Systems. The Journal of Physical Chemistry B, 113 (18). 6484-6494 doi:10.1021/jp809641j
Lechner, Wolfgang, Rogal, Jutta, Juraszek, Jarek, Ensing, Bernd, Bolhuis, Peter G. (2010) Nonlinear reaction coordinate analysis in the reweighted path ensemble. The Journal of Chemical Physics, 133 (17). 174110pp. doi:10.1063/1.3491818
Vreede, J., Juraszek, J., Bolhuis, P. G. (2010) Predicting the reaction coordinates of millisecond light-induced conformational changes in photoactive yellow protein. Proceedings of the National Academy of Sciences, 107 (6) 2397-2402 doi:10.1073/pnas.0908754107
Roet, Sander, Hooft, Ferry, Bolhuis, Peter G., Swenson, David W. H., Vreede, Jocelyne (2022) Path Sampling Simulations Reveal How the Q61L Mutation Alters the Dynamics of KRas. The Journal of Physical Chemistry B, 126 (48) 10034-10044 doi:10.1021/acs.jpcb.2c06235
Rogal, Jutta, Bolhuis, Peter G. (2008) Multiple state transition path sampling. The Journal of Chemical Physics, 129 (22). 224107pp. doi:10.1063/1.3029696
Bolhuis, Peter G., Chandler, David (2000) Transition path sampling of cavitation between molecular scale solvophobic surfaces. The Journal of Chemical Physics, 113 (18). 8154-8160 doi:10.1063/1.1315997
Christie, Robson, Bolhuis, Peter G., Limmer, David T. (2025) Transition path and interface sampling of stochastic Schrödinger dynamics. The Journal of Chemical Physics, 162 (11). doi:10.1063/5.0246727
Bolhuis, Peter G., Csányi, Gábor (2018) Nested Transition Path Sampling. Physical Review Letters, 120 (25). doi:10.1103/physrevlett.120.250601
Bolhuis, Peter G (2003) Transition path sampling on diffusive barriers. Journal of Physics: Condensed Matter, 15 (1). doi:10.1088/0953-8984/15/1/314
Leenders, Elske J. M., Guidoni, Leonardo, Röthlisberger, Ursula, Vreede, Jocelyne, Bolhuis, Peter G., Meijer, Evert Jan (2007) Protonation of the Chromophore in the Photoactive Yellow Protein. The Journal of Physical Chemistry B, 111 (14). 3765-3773 doi:10.1021/jp067158b
 
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