Log InRegister
Quick Links : The Mindat ManualThe Rock H. Currier Digital LibraryMindat Newsletter [Free Download]
Home PageAbout MindatThe Mindat ManualHistory of MindatCopyright StatusWho We AreContact UsAdvertise on Mindat
Donate to MindatCorporate SponsorshipSponsor a PageSponsored PagesMindat AdvertisersAdvertise on Mindat
Learning CenterWhat is a mineral?The most common minerals on earthInformation for EducatorsMindat ArticlesThe ElementsThe Rock H. Currier Digital LibraryGeologic Time
Minerals by PropertiesMinerals by ChemistryAdvanced Locality SearchRandom MineralRandom LocalitySearch by minIDLocalities Near MeSearch ArticlesSearch GlossaryMore Search Options
Search For:
Mineral Name:
Locality Name:
Keyword(s):
 
The Mindat ManualAdd a New PhotoRate PhotosLocality Edit ReportCoordinate Completion ReportAdd Glossary Item
Mining CompaniesStatisticsUsersMineral MuseumsClubs & OrganizationsMineral Shows & EventsThe Mindat DirectoryDevice SettingsThe Mineral Quiz
Photo SearchPhoto GalleriesSearch by ColorNew Photos TodayNew Photos YesterdayMembers' Photo GalleriesPast Photo of the Day GalleryPhotography

Elmer, Sidney P., Park, Sanghyun, Pande, Vijay S. (2005) Foldamer dynamics expressed via Markov state models. I. Explicit solvent molecular-dynamics simulations in acetonitrile, chloroform, methanol, and water. The Journal of Chemical Physics, 123 (11). 114902pp. doi:10.1063/1.2001648

Advanced
   -   Only viewable:
Reference TypeJournal (article/letter/editorial)
TitleFoldamer dynamics expressed via Markov state models. I. Explicit solvent molecular-dynamics simulations in acetonitrile, chloroform, methanol, and water
JournalThe Journal of Chemical Physics
AuthorsElmer, Sidney P.Author
Park, SanghyunAuthor
Pande, Vijay S.Author
Year2005 (September 15)Volume123
Issue11
PublisherAIP Publishing
DOIdoi:10.1063/1.2001648Search in ResearchGate
Generate Citation Formats
Mindat Ref. ID2296986Long-form Identifiermindat:1:5:2296986:0
GUID0
Full ReferenceElmer, Sidney P., Park, Sanghyun, Pande, Vijay S. (2005) Foldamer dynamics expressed via Markov state models. I. Explicit solvent molecular-dynamics simulations in acetonitrile, chloroform, methanol, and water. The Journal of Chemical Physics, 123 (11). 114902pp. doi:10.1063/1.2001648
Plain TextElmer, Sidney P., Park, Sanghyun, Pande, Vijay S. (2005) Foldamer dynamics expressed via Markov state models. I. Explicit solvent molecular-dynamics simulations in acetonitrile, chloroform, methanol, and water. The Journal of Chemical Physics, 123 (11). 114902pp. doi:10.1063/1.2001648
In(2005, September) The Journal of Chemical Physics Vol. 123 (11) AIP Publishing

See Also

These are possibly similar items as determined by title/reference text matching only.

Elmer, Sidney P., Park, Sanghyun, Pande, Vijay S. (2005) Foldamer dynamics expressed via Markov state models. II. State space decomposition. The Journal of Chemical Physics, 123 (11). 114903pp. doi:10.1063/1.2008230
Elmer, Sidney P., Pande, Vijay S. (2004) Foldamer simulations: Novel computational methods and applications to poly-phenylacetylene oligomers. The Journal of Chemical Physics, 121 (24). 12760pp. doi:10.1063/1.1812272
Park, Sanghyun, Pande, Vijay S. (2006) Validation of Markov state models using Shannon’s entropy. The Journal of Chemical Physics, 124 (5). 54118pp. doi:10.1063/1.2166393
Singhal, Nina, Pande, Vijay S. (2005) Error analysis and efficient sampling in Markovian state models for molecular dynamics. The Journal of Chemical Physics, 123 (20). 204909pp. doi:10.1063/1.2116947
Sinitskiy, Anton V., Pande, Vijay S. (2018) Theoretical restrictions on longest implicit time scales in Markov state models of biomolecular dynamics. The Journal of Chemical Physics, 148 (4). 44111pp. doi:10.1063/1.5005058
Jayachandran, Guha, Shirts, Michael R., Park, Sanghyun, Pande, Vijay S. (2006) Parallelized-over-parts computation of absolute binding free energy with docking and molecular dynamics. The Journal of Chemical Physics, 125 (8). 84901pp. doi:10.1063/1.2221680
England, Jeremy L., Park, Sanghyun, Pande, Vijay S. (2008) Theory for an order-driven disruption of the liquid state in water. The Journal of Chemical Physics, 128 (4). 44503pp. doi:10.1063/1.2823129
Elmer, Sidney P., Pande, Vijay S. (2005) Length dependent folding kinetics of phenylacetylene oligomers: Structural characterization of a kinetic trap. The Journal of Chemical Physics, 122 (12). 124908pp. doi:10.1063/1.1867375
Park, Sanghyun, Radmer, Randall J., Klein, Teri E., Pande, Vijay S. (2005) A new set of molecular mechanics parameters for hydroxyproline and its use in molecular dynamics simulations of collagen-like peptides. Journal of Computational Chemistry, 26 (15). 1612-1616 doi:10.1002/jcc.20301
Hinrichs, Nina Singhal, Pande, Vijay S. (2007) Calculation of the distribution of eigenvalues and eigenvectors in Markovian state models for molecular dynamics. The Journal of Chemical Physics, 126 (24). 244101pp. doi:10.1063/1.2740261
Bacallado, Sergio, Chodera, John D., Pande, Vijay (2009) Bayesian comparison of Markov models of molecular dynamics with detailed balance constraint. The Journal of Chemical Physics, 131 (4). 45106pp. doi:10.1063/1.3192309
 
and/or  
Mindat.org is an outreach project of the Hudson Institute of Mineralogy, a 501(c)(3) not-for-profit organization.
Copyright © mindat.org and the Hudson Institute of Mineralogy 1993-2025, except where stated. Most political location boundaries are © OpenStreetMap contributors. Mindat.org relies on the contributions of thousands of members and supporters. Founded in 2000 by Jolyon Ralph.
To cite: Ralph, J., Von Bargen, D., Martynov, P., Zhang, J., Que, X., Prabhu, A., Morrison, S. M., Li, W., Chen, W., & Ma, X. (2025). Mindat.org: The open access mineralogy database to accelerate data-intensive geoscience research. American Mineralogist, 110(6), 833–844. doi:10.2138/am-2024-9486.
Privacy Policy - Terms & Conditions - Contact Us / DMCA issues - Report a bug/vulnerability Current server date and time: August 29, 2025 02:16:56
Go to top of page